SubtiBank SubtiBank
yclI [2019-04-29 14:15:41]
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yclI [2019-04-29 14:15:41]

similar to ABC transporter (membrane protein)
locus
BSU03740
pI
5.06
mw
51.75 kDa
protein length
486 aa Sequence Blast
gene length
1461 bp Sequence Blast
function
unknown
product
ABC transporter (membrane protein)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    424,904 → 426,364

    The protein

    Protein family

  • ABC-4 integral membrane protein family (according to Swiss-Prot)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|FFCC02FA996D570C69F79AAC22C2C4FCAD9E89D9|yclI]-[gene|B23CAC2563A36415C482AE2FA695E09228EF5B32|yclH]
    description
    [Pubmed|20512483]

    regulatory mechanism

  • [protein|706983E6942E883D3A9D45693E7B4015AEABE60B|YclJ]: activation, [Pubmed|20512483], in [regulon|706983E6942E883D3A9D45693E7B4015AEABE60B|YclJ regulon]
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    Biological materials

    Mutant

  • MGNA-C006 (yclI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2004 NBRP B. subtilis, Japan]
  • BKE03740 (Δ[gene|FFCC02FA996D570C69F79AAC22C2C4FCAD9E89D9|yclI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE03740 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTATGTTCCTCCGTATA, downstream forward: _UP4_TAGAAAGAGGCGGAACCTAT
  • BKK03740 (Δ[gene|FFCC02FA996D570C69F79AAC22C2C4FCAD9E89D9|yclI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK03740 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTATGTTCCTCCGTATA, downstream forward: _UP4_TAGAAAGAGGCGGAACCTAT

    • References

  • 10092453,20512483,21630458